Stem-loop eca-mir-9157

Accession

MI0028381

Description

Equus caballus eca-mir-9157 precursor miRNA

Sequence

aaacgggguggcuccucccgacaccgcaacagccccacccUCGGGCUCUCUCGCCGGAUACCUGGcauaaaugggcagugcuagguggagcguccugggggagaagcugggggugugggugcugggcugaagaaggaagcucacc
......((((((((((..(..((..((..(((((((((((((.(((((((((.(.(((((((((((((.........))))))))).....)))).).))))).)))).)))).))))).)))).))))..).))).))).))))

Structure

aaacgg    -   -   cc ga  cc  aa    -     -    G    -     G C    -----         aaa 
      ggug gcu ccu  c  ca  gc  cagc cccac ccUC GGCU CUCUC C GGAU     ACCUGGcau   u
      |||| ||| |||  |  ||  ||  |||| ||||| |||| |||| ||||| | ||||     |||||||||   g
      ccac cga gga  g  gu  cg  gucg gggug gggg ucga gaggg g ccug     uggaucgug   g
------    u   a   -a aa  --  -g    u     u    g    a     g u    cgagg         acg 

Annotation confidence Not enough data

Genome context

chr14: 35351188-35351332 [-]

Mature eca-miR-9157

• Accession: MIMAT0034734
• Description: Equus caballus eca-miR-9157 mature miRNA
• Sequence: 41 - UCGGGCUCUCUCGCCGGAUACCUGG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545