miRBase entry: eca-mir-9172

Stem-loop eca-mir-9172


Accession
MI0028400
Description
Equus caballus eca-mir-9172 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
guggaaaaaucucuggagucagaggccugggcgcaGCUCUGGACUCUGCGUAUAACAGugagugucaagcccagggugguaugggucagaggaaagggugaagggccaaggccuggcugacuagauccacc
(((((....(((....((((((((((((.(((.(.(((((...((((((.((((((..((.((.....)).))..))..)))).).)))))...)))))...).))).))))))..)))))))))))))).

Structure
-     aaaa   cugg      --      g   g --a     GGA     - G    --  AG  a  g 
 gugga    ucu    agucag  aggccu ggc c   GCUCU   CUCUG C UAUA  AC  ug gu u
 |||||    |||    ||||||  |||||| ||| |   |||||   ||||| | ||||  ||  || || c
 caccu    aga    ucaguc  uccgga ccg g   uggga   gagac g guau  ug  ac cg a
c     ----   ----      gg      a   g aag     aag     u g    gg  gg  c  a 


Annotation confidence Not enough data
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Genome context
chr16: 37519596-37519726 [-]

Database links

Mature eca-miR-9172

Accession MIMAT0034752
Description Equus caballus eca-miR-9172 mature miRNA
Sequence 36 - GCUCUGGACUCUGCGUAUAACAG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545