miRBase entry: eca-mir-9178

Stem-loop eca-mir-9178


Accession
MI0028407
Description
Equus caballus eca-mir-9178 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
cagauaguaaauguuucaggcuuccugggucauaugcaggucaucuccuauuuuucuccucuuuggcaguacaaaaaUAGGCUGUGGGCUGCAUUUGGCcuauggggcuuccuaguuugccagucccuauccaagacca
..(((.((((((.....(((((((.(((((((.((((((.((((..(((((((((((((.....)).))...)))))))))..)))).)))))).))))))).)))))))....))))))..)))..............

Structure
------------ca   -a      guuuc       c       u      g    cu         ---  -  u 
              gau  guaaau     aggcuuc uggguca augcag ucau  ccuauuuuu   cu cc c
              |||  ||||||     ||||||| ||||||| |||||| ||||  |||||||||   || || u
              cug  cguuug     uucgggg aucCGGU UACGUC GGUG  GGAUaaaaa   ga gg u
accagaaccuaucc   ac      -aucc       u       U      G    UC         cau  c  u 


Annotation confidence Not enough data
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Genome context
chr19: 18788693-18788831 [+]

Database links

Mature eca-miR-9178

Accession MIMAT0034758
Description Equus caballus eca-miR-9178 mature miRNA
Sequence 78 - UAGGCUGUGGGCUGCAUUUGGC - 99
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545