miRBase entry: efu-mir-9201a-3

Stem-loop efu-mir-9201a-3


Accession
MI0028447
Description
Eptesicus fuscus efu-mir-9201a-3 precursor miRNA
Gene family
MIPF0001898; mir-9201


Sequence

agagaccugaagagagaggcagggucugauccucagcuucuguggcagcuguugAUCAGCUGUUGCCUCUCUCUUUcucuccaggc
.((((...((((((((((((((.(.((((((..(((((........)))))..)))))).).)))))))))))))).)))).....

Structure
----a    ccu              g u      cu     ucu 
     gaga   gaagagagaggcag g cugauc  cagcu   g
     ||||   |||||||||||||| | ||||||  |||||    
     cucu   UUUCUCUCUCCGUU U GACUAg  gucga   u
cggac    --c              G C      uu     cgg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH977662.1: 3230783-3230868 [-]

Database links

Mature efu-miR-9201a

Accession MIMAT0034785
Description Eptesicus fuscus efu-miR-9201a mature miRNA
Sequence 55 - AUCAGCUGUUGCCUCUCUCUUU - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545