miRBase entry: efu-mir-9223c-2

Stem-loop efu-mir-9223c-2


Accession
MI0028486
Description
Eptesicus fuscus efu-mir-9223c-2 precursor miRNA
Gene family
MIPF0001885; mir-9223


Sequence

agggcagcucUCGGGUGACACACCCUGGAAUcaggcucccuccugucugguucugggugcgucacccgagaaccgcagcua
..(((.(((((((((((((.(((((.((((((((((........))))))))))))))).)))))))))))...)).))).

Structure
ag   a  ---           A     U          ucc 
  ggc gc   ucUCGGGUGAC CACCC GGAAUcaggc   c
  ||| ||   ||||||||||| ||||| ||||||||||    
  ucg cg   agagcccacug guggg ucuuggucug   u
-a   a  cca           c     -          ucc 


Annotation confidence Not enough data
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Genome context
JH977617.1: 7026142-7026222 [+]

Database links

Mature efu-miR-9223c

Accession MIMAT0034818
Description Eptesicus fuscus efu-miR-9223c mature miRNA
Sequence 11 - UCGGGUGACACACCCUGGAAU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545