miRBase entry: efu-mir-9228-1

Stem-loop efu-mir-9228-1


Accession
MI0028500
Description
Eptesicus fuscus efu-mir-9228-1 precursor miRNA
Gene family
MIPF0001876; mir-9228


Sequence

gaaauaaaucUUGGCUGUGAGGACCUGCUGUGUCUauaacggaagaauugcugugcuggagauacaguagggcuuuggugcucacugagucuuccuc
............(((((((((.(((((((((((((...((((........)))).....)))))))))).......))).)))))..))))......

Structure
gaaauaaaucUU    --     G   -------          --aua    aag 
            GGCU  GUGAG ACC       UGCUGUGUCU     acgg   a
            ||||  ||||| |||       ||||||||||     ||||    
            cuga  cacuc ugg       augacauaga     uguc   a
------cuccuu    gu     g   uuucggg          ggucg    guu 


Annotation confidence Not enough data
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Genome context
JH977665.1: 9282278-9282374 [-]

Database links

Mature efu-miR-9228

Accession MIMAT0034830
Description Eptesicus fuscus efu-miR-9228 mature miRNA
Sequence 11 - UUGGCUGUGAGGACCUGCUGUGUCU - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545