miRBase entry: efu-mir-34b

Stem-loop efu-mir-34b


Accession
MI0028575
Description
Eptesicus fuscus efu-mir-34b precursor miRNA
Gene family
MIPF0000039; mir-34


Sequence

ugcucgguuuguaggcaguguaauuagcugauugugcucugugcuugCAAUCACUAACUCCACUGCCAUCAAaacaaggcac
((((..((((...(((((((...((((.(((((((((.....))..)))))))))))...)))))))....))))..)))).

Structure
-    cg    -gua       uaa    c       --  u 
 ugcu  guuu    ggcagug   uuag ugauugu  gc c
 ||||  ||||    |||||||   |||| |||||||  || u
 acgg  caaA    CCGUCAC   AAUC ACUAACg  cg g
c    aa    ACUA       CUC    -       uu  u 


Annotation confidence Not enough data
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Genome context
JH977889.1: 779590-779671 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-34b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-34b

Accession MIMAT0034891
Description Eptesicus fuscus efu-miR-34b mature miRNA
Sequence 48 - CAAUCACUAACUCCACUGCCAUCAA - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545