miRBase entry: efu-mir-9266

Stem-loop efu-mir-9266

Accession

MI0028580

Description

Eptesicus fuscus efu-mir-9266 precursor miRNA

Sequence

ggugucgcggUGGCUGAGCGCCCUGUUCCGUCACaggucgccuguuggcacugucugcgacgggaaucugggugcaaagucaccccagcgugac
...((((((((((((..((((((..(((((((.((((..(((....)))....)))).)))))))....))))))..))))))).....)))))

Structure

ggu     -----       GA      --UG       A    --uc   u 
   gucgc     ggUGGCU  GCGCCC    UUCCGUC Cagg    gcc g
   |||||     |||||||  ||||||    ||||||| ||||    |||  
   cagug     ccacuga  cguggg    agggcag gucu    cgg u
---     cgacc       aa      ucua       c    guca   u

Annotation confidence Not enough data

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Genome context

JH977806.1: 747690-747783 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-9266

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9266

Accession	MIMAT0034896
Description	Eptesicus fuscus efu-miR-9266 mature miRNA
Sequence	11 - UGGCUGAGCGCCCUGUUCCGUCAC - 34
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545