miRBase entry: efu-mir-199-2

Stem-loop efu-mir-199-2


Accession
MI0028631
Description
Eptesicus fuscus efu-mir-199-2 precursor miRNA
Gene family
MIPF0000040; mir-199


Sequence

gccccgccaacccaguguucagacuaccuguucagggggcucugaaugugUACAGUAGUCUGCACAUUGGUUAggcugggcuu
((((.(((...(((((((.((((((((.((((((((....)))))......))))))))))).)))))))...))).))))..

Structure
--    c   aac       u        c   ------     g 
  gccc gcc   ccagugu cagacuac ugu      ucagg g
  |||| |||   ||||||| |||||||| |||      |||||  
  cggg cgg   GGUUACA GUCUGAUG ACA      agucu g
uu    u   AUU       C        -   Ugugua     c 


Annotation confidence Not enough data
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Genome context
JH977791.1: 1080038-1080120 [+]

Database links

Mature efu-miR-199

Accession MIMAT0034946
Description Eptesicus fuscus efu-miR-199 mature miRNA
Sequence 51 - UACAGUAGUCUGCACAUUGGUUA - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545