miRBase entry: efu-mir-342

Stem-loop efu-mir-342


Accession
MI0028651
Description
Eptesicus fuscus efu-mir-342 precursor miRNA
Gene family
MIPF0000190; mir-342


Sequence

gcgcaaggugaggggugcuaucugugauugagggacauggcgcauagaauugUCUCACACAGAAAUCGCACCCGUCAccuuggccca
((.((((((((.((((((..((((((.....((((((...(.....)...)))))).))))))....)))))).))))))))))...

Structure
---  g        g      --ua      auuga      ugg g 
   gc caagguga gggugc    ucugug     gggaca   c c
   || |||||||| ||||||    ||||||     ||||||   | a
   cg guuccACU CCCACG    AGACAC     CUCUgu   g u
acc  -        G      CUAA      ----A      uaa a 


Annotation confidence Not enough data
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Genome context
JH977717.1: 1659627-1659713 [-]

Database links

Mature efu-miR-342

Accession MIMAT0034966
Description Eptesicus fuscus efu-miR-342 mature miRNA
Sequence 53 - UCUCACACAGAAAUCGCACCCGUCA - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545