miRBase entry: efu-mir-9320

Stem-loop efu-mir-9320


Accession
MI0028695
Description
Eptesicus fuscus efu-mir-9320 precursor miRNA


Sequence

gugggccccaauggcaucugacaguuggcaguuggacaagguucugagcaggcaagaccCUUGAACUGUUGAACUUGCUUUUUGggauucggac
.((((.(((((.((((......(((((((((((...(((((.(((.........))).)))))))))))).))))))))..))))).))))...

Structure
--g    c     -u    ucugac    -       gga     u   gag 
   uggg cccaa  ggca      aguu ggcaguu   caagg ucu   c
   |||| |||||  ||||      |||| |||||||   ||||| |||   a
   gcuu ggGUU  UCGU      UCAA UUGUCAA   GUUCc aga   g
cag    a     UU    ------    G       ---     c   acg 


Annotation confidence Not enough data
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Genome context
JH977736.1: 3746895-3746988 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-9320
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9320

Accession MIMAT0035010
Description Eptesicus fuscus efu-miR-9320 mature miRNA
Sequence 60 - CUUGAACUGUUGAACUUGCUUUUUG - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545