miRBase entry: efu-let-7d

Stem-loop efu-let-7d


Accession
MI0028701
Description
Eptesicus fuscus efu-let-7d precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

guuccuaggaAGAGGUAGUAGGUUGCAUAGUUUUagggcagggauuuugcccacaaggagguaacuauacgaccugcugccuuucuuagggccuua
..((((((((.((((((((((((((.((((((...((((((.....))))))..........)))))).)))))))))))))))))))))).....

Structure
---gu        A              C      -------UUa      g 
     uccuagga GAGGUAGUAGGUUG AUAGUU          gggcag g
     |||||||| |||||||||||||| ||||||          |||||| a
     gggauucu uuccgucguccagc uaucaa          cccguu u
auucc        -              a      uggaggaaca      u 


Annotation confidence Not enough data
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Genome context
JH977714.1: 1026627-1026722 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-let-7d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-let-7d

Accession MIMAT0035016
Description Eptesicus fuscus efu-let-7d mature miRNA
Sequence 11 - AGAGGUAGUAGGUUGCAUAGUUUU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545