miRBase entry: efu-mir-146

Stem-loop efu-mir-146


Accession
MI0028705
Description
Eptesicus fuscus efu-mir-146 precursor miRNA
Gene family
MIPF0000103; mir-146


Sequence

caccuggcucugagaacugaauuccauaggcugugagcucuagcaaaUGCCCUAGGGACUCAGUUCUGGUgcccggcugu
..((.(((.((.((((((((.((((.((((.(((..((....))..))).)))))))).)))))))))).))).))....

Structure
--ca  u   u  g        a    a    c   ga  u 
    cc ggc cu agaacuga uucc uagg ugu  gc c
    || ||| || |||||||| |||| |||| |||  ||  
    gg ccg GG UCUUGACU AGGG AUCC GUa  cg u
uguc  c   U  -        C    -    C   aa  a 


Annotation confidence Not enough data
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Genome context
JH977636.1: 5973083-5973162 [+]

Database links

Mature efu-miR-146

Accession MIMAT0035020
Description Eptesicus fuscus efu-miR-146 mature miRNA
Sequence 48 - UGCCCUAGGGACUCAGUUCUGGU - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545