miRBase entry: efu-mir-495

Stem-loop efu-mir-495


Accession
MI0028716
Description
Eptesicus fuscus efu-mir-495 precursor miRNA
Gene family
MIPF0000110; mir-329


Sequence

guuccugaaaagaaguugcccauguucuuuucgcguaauaugugacgAAACAAACAUGGUGCACUUCUUUcccgggauca
(.(((((.((((((((.(((((((((..(((((((.......)).)))))..))))))).))))))))))..))))).).

Structure
- u     -a        u  -       cu     -  ua 
 g uccug  aaagaagu gc ccauguu  uuucg cg  a
 | |||||  |||||||| || |||||||  ||||| ||  u
 c agggc  UUUCUUCA CG GGUACAA  AAAgc gu  a
a u     cc        -  U       AC     a  gu 


Annotation confidence Not enough data
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Genome context
JH977717.1: 859846-859925 [-]
Clustered miRNAs
9 other miRNAs are < 10 kb from efu-mir-495
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-495

Accession MIMAT0035031
Description Eptesicus fuscus efu-miR-495 mature miRNA
Sequence 48 - AAACAAACAUGGUGCACUUCUUU - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545