miRBase entry: efu-mir-412

Stem-loop efu-mir-412


Accession
MI0028728
Description
Eptesicus fuscus efu-mir-412 precursor miRNA
Gene family
MIPF0000192; mir-412


Sequence

acaggaugggUGGUCGACCAGUUGGAAAGUAAUuguuucuaauguacuucaccugguccacuagccguccguauc
...((((((.((((.((((((.(((..((((((((....)))).))))))).)))))).)))).)))))).....

Structure
--aca      g    C      U   AA    -    u 
     ggaugg UGGU GACCAG UGG  AGUA AUug u
     |||||| |||| |||||| |||  |||| ||||  
     ccugcc auca cugguc acu  ucau uaau u
cuaug      g    c      c   --    g    c 


Annotation confidence Not enough data
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Genome context
JH977717.1: 832912-832986 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from efu-mir-412
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-412

Accession MIMAT0035043
Description Eptesicus fuscus efu-miR-412 mature miRNA
Sequence 11 - UGGUCGACCAGUUGGAAAGUAAU - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545