miRBase entry: efu-mir-9186d-2

Stem-loop efu-mir-9186d-2

Accession

MI0028735

Description

Eptesicus fuscus efu-mir-9186d-2 precursor miRNA

Gene family

MIPF0001868; mir-9186

Sequence

agggggagguuggcgguaucacugguacuguuguaaugccuguccACAGUAGCAGACAUGCCGCCCUCcucccccuac
(((((((((..((((((((..(((.((((((.(..........).)))))).)))..))))))))..)))))))))..

Structure

--         uu        ca   g      u uaau 
  agggggagg  ggcgguau  cug uacugu g    g
  |||||||||  ||||||||  ||| |||||| |     
  ucccccucC  CCGCCGUA  GAC AUGACA c    c
ca         UC        CA   G      c uguc

Annotation confidence Not enough data

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Genome context

JH977753.1: 16379-16456 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from efu-mir-9186d-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9186d

Accession	MIMAT0035048
Description	Eptesicus fuscus efu-miR-9186d mature miRNA
Sequence	46 - ACAGUAGCAGACAUGCCGCCCUC - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545