miRBase entry: efu-mir-214

Stem-loop efu-mir-214


Accession
MI0028768
Description
Eptesicus fuscus efu-mir-214 precursor miRNA
Gene family
MIPF0000062; mir-214


Sequence

gucaugugucugccugucuacacuugcugugcagaacauccgcucaccugUACAGCAGGCACAGACAGGCAGUcacaugacaa
((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))..

Structure
--        u          aca            aacau 
  gucaugug cugccugucu   cuugcugugcag     c
  |||||||| ||||||||||   ||||||||||||     c
  caguacac GACGGACAGA   GGACGACAUguc     g
aa        U          CAC            cacuc 


Annotation confidence Not enough data
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Genome context
JH977644.1: 1285936-1286018 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-214
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-214

Accession MIMAT0035078
Description Eptesicus fuscus efu-miR-214 mature miRNA
Sequence 51 - UACAGCAGGCACAGACAGGCAGU - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545