miRBase entry: efu-mir-381

Stem-loop efu-mir-381


Accession
MI0028786
Description
Eptesicus fuscus efu-mir-381 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

ugguacuuaaagcgagguugcccuuuguauauucggguuuuugacauagaAUAUACAAGGGCAAGCUCUCUGUgaguaucaaa
(((((((((.((.(((.((((((((.((((((((..(((...)))...)))))))))))))))).))).)).)))))))))..

Structure
--         a  c   g        u        -gg   u 
  ugguacuua ag gag uugcccuu guauauuc   guu  
  ||||||||| || ||| |||||||| ||||||||   ||| u
  acuaugagU UC CUC AACGGGAA CAUAUAag   cag  
aa         G  U   G        -        aua   u 


Annotation confidence Not enough data
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Genome context
JH977717.1: 850848-850930 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from efu-mir-381
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-381

Accession MIMAT0035093
Description Eptesicus fuscus efu-miR-381 mature miRNA
Sequence 51 - AUAUACAAGGGCAAGCUCUCUGU - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545