miRBase entry: efu-mir-141

Stem-loop efu-mir-141


Accession
MI0028790
Description
Eptesicus fuscus efu-mir-141 precursor miRNA
Gene family
MIPF0000019; mir-8


Sequence

gcucugggcccaucuuccaguacaguguuggauggucuaaucucgaagcuccUAACACUGUCUGGUAAAGAUGGCccccgggcug
((((.(((.(((((((((((.(((((((((((...((.......))...))).))))))))))))..))))))).))).))))..

Structure
--    u   c       --    u        -   ugg  ua 
  gcuc ggg ccaucuu  ccag acaguguu gga   uc  a
  |||| ||| |||||||  |||| |||||||| |||   ||  u
  cggg ccc GGUAGAA  GGUC UGUCACAA ccu   ag  c
gu    c   C       AU    -        U   cga  cu 


Annotation confidence Not enough data
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Genome context
JH977638.1: 17350306-17350390 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-141
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-141

Accession MIMAT0035097
Description Eptesicus fuscus efu-miR-141 mature miRNA
Sequence 53 - UAACACUGUCUGGUAAAGAUGGC - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545