miRBase entry: efu-mir-9279a-4

Stem-loop efu-mir-9279a-4


Accession
MI0028810
Description
Eptesicus fuscus efu-mir-9279a-4 precursor miRNA
Gene family
MIPF0001911; mir-9279


Sequence

gucugugugaggccacgcgucccuggguccgggugaggccauguguCCCUGGAUCCGGGUGAGGCCUUgcacaccuag
...(((((((((((.....((((((((((((((.((.((...)).)))))))))))))).))))))))))))).....

Structure
--guc           acgcg  -            u  g  c 
     ugugugaggcc     uc ccuggguccggg ga gc  
     |||||||||||     || |||||||||||| || || a
     acacgUUCCGG     AG GGGCCUAGGUCC Cu ug  
gaucc           -----  U            -  g  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ALEH01164984.1: 93-170 [-]

Database links

Mature efu-miR-9279a

Accession MIMAT0034917
Description Eptesicus fuscus efu-miR-9279a mature miRNA
Sequence 47 - CCCUGGAUCCGGGUGAGGCCUU - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545