miRBase entry: efu-mir-9186f-3

Stem-loop efu-mir-9186f-3

Accession

MI0028813

Description

Eptesicus fuscus efu-mir-9186f-3 precursor miRNA

Gene family

MIPF0001868; mir-9186

Sequence

uagggggagggaggaggcauggcugguaguauguuaauagcuguccAUACUGCCAGACAUGCCACCUUUCucacccuaca
(((((.((((((((.((((((.(((((((((((............))))))))))).)))))).)))))))).)))))..

Structure

--     g        a      g           uuaau 
  uaggg gagggagg ggcaug cugguaguaug     a
  ||||| |||||||| |||||| |||||||||||      
  auccc cuCUUUCC CCGUAC GACCGUCAUAc     g
ac     a        A      A           cuguc

Annotation confidence Not enough data

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Genome context

JH977753.1: 8086-8165 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from efu-mir-9186f-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9186f

Accession	MIMAT0034908
Description	Eptesicus fuscus efu-miR-9186f mature miRNA
Sequence	47 - AUACUGCCAGACAUGCCACCUUUC - 70
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545