miRBase entry: efu-mir-9-3

Stem-loop efu-mir-9-3


Accession
MI0028818
Description
Eptesicus fuscus efu-mir-9-3 precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

cgaguuguuaUCUUUGGUUAUCUAGCUGUAUGAGUguauuggucuucAUAAAGCUAGAUAACCGAAAGUAaaaacuccuu
.(((((.((((.(((((((((((((((.((((((.(.......))))))).))))))))))))))).)))).)))))...

Structure
--c     g    C               G      U ua 
   gaguu uuaU UUUGGUUAUCUAGCU UAUGAG g  u
   ||||| |||| ||||||||||||||| |||||| |  u
   cucaa aAUG AAGCCAAUAGAUCGA AUAcuu c  g
uuc     a    A               A      - ug 


Annotation confidence Not enough data
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Genome context
JH977616.1: 31454199-31454278 [-]

Database links

Mature efu-miR-9-5p

Accession MIMAT0034937
Description Eptesicus fuscus efu-miR-9-5p mature miRNA
Sequence 11 - UCUUUGGUUAUCUAGCUGUAUGAGU - 35
Evidence experimental
Illumina [1]

Mature efu-miR-9-3p

Accession MIMAT0034938
Description Eptesicus fuscus efu-miR-9-3p mature miRNA
Sequence 48 - AUAAAGCUAGAUAACCGAAAGUA - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545