miRBase entry: efu-mir-152

Stem-loop efu-mir-152


Accession
MI0028836
Description
Eptesicus fuscus efu-mir-152 precursor miRNA
Gene family
MIPF0000056; mir-148


Sequence

uccccccggcccagguucugugauacacuccgacucgggcucuggagcaGUCAGUGCAUGACAGAACUUGGGCccgggcggac
((((((.((((((((((((((.((.((((..((((...(((....))))))))))).)).)))))))))))))).))).))).

Structure
-   -   c              g  a    cc    cgg   c 
 ucc ccc ggcccagguucugu au cacu  gacu   gcu u
 ||| ||| |||||||||||||| || ||||  ||||   |||  
 agg ggg cCGGGUUCAAGACA UA GUGA  CUGa   cga g
c   c   c              G  C    --    ---   g 


Annotation confidence Not enough data
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Genome context
JH977703.1: 3487495-3487577 [+]

Database links

Mature efu-miR-152

Accession MIMAT0035134
Description Eptesicus fuscus efu-miR-152 mature miRNA
Sequence 50 - GUCAGUGCAUGACAGAACUUGGGC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545