miRBase entry: efu-mir-30e

Stem-loop efu-mir-30e


Accession
MI0028839
Description
Eptesicus fuscus efu-mir-30e precursor miRNA
Gene family
MIPF0000005; mir-30


Sequence

1 reads, 1292 reads per million, 1 experiments
ucuuugcuacuguaaacauccuugacuggaagcuguaagguguucagaggaGCUUUCAGUCGGAUGUUUACAGCggcaggcugc
..((((((.((((((((((((..(((((((((((.(...(....)...).))))))))))))))))))))))).))))))....

Structure
--uc      a            uu           g aag u 
    uuugcu cuguaaacaucc  gacuggaagcu u   g g
    |||||| ||||||||||||  ||||||||||| |   |  
    ggacgg GACAUUUGUAGG  CUGACUUUCGa g   c u
cguc      C            --           g aga u 


Annotation confidence Not enough data
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Genome context
JH977676.1: 8262625-8262708 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-30e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-30e

Accession MIMAT0035136
Description Eptesicus fuscus efu-miR-30e mature miRNA
Sequence 52 - GCUUUCAGUCGGAUGUUUACAGC - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545