Stem-loop efu-mir-1842

Accession

MI0028840

Description

Eptesicus fuscus efu-mir-1842 precursor miRNA

Gene family

MIPF0000788; mir-1842

Sequence

ggugcugacgUUGGCUCUGCGAGGUCGGCUCAAGgugggucuggauauugagcaggccugucagggcguugucacccacacc
((((.(((((...((((((..(((((.((((((.((........)).)))))).)))))..))))))..)))))....))))

Structure

    ---c     UUG      CG     G      G  ggg 
ggug    ugacg   GCUCUG  AGGUC GCUCAA gu   u
||||    |||||   ||||||  ||||| |||||| ||    
ccac    acugu   cgggac  uccgg cgaguu ua   c
    accc     -ug      ug     a      a  ggu 

Annotation confidence Not enough data

Genome context

JH977648.1: 942520-942601 [-]

Mature efu-miR-1842

• Accession: MIMAT0035137
• Description: Eptesicus fuscus efu-miR-1842 mature miRNA
• Sequence: 11 - UUGGCUCUGCGAGGUCGGCUCAAG - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545