miRBase entry: efu-mir-21

Stem-loop efu-mir-21


Accession
MI0028851
Description
Eptesicus fuscus efu-mir-21 precursor miRNA
Gene family
MIPF0000060; mir-21


Sequence

ccuugucggguagcuuaucagacugauguugacuguugaaucucauggCAACAGCAGUCGAUGGGCUGUCugacauuuug
...((((((((((((((((.(((((.(((((.((((.((...))))))))))).))))))))))))))))))))).....

Structure
--ccu                a     a     a    u  a 
     ugucggguagcuuauc gacug uguug cugu ga  
     |||||||||||||||| ||||| ||||| |||| || u
     acaguCUGUCGGGUAG CUGAC ACAAC ggua cu  
guuuu                -     G     -    -  c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH977664.1: 7640732-7640811 [+]

Database links

Mature efu-miR-21

Accession MIMAT0035146
Description Eptesicus fuscus efu-miR-21 mature miRNA
Sequence 49 - CAACAGCAGUCGAUGGGCUGUC - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545