miRBase entry: efu-mir-139

Stem-loop efu-mir-139


Accession
MI0028870
Description
Eptesicus fuscus efu-mir-139 precursor miRNA
Gene family
MIPF0000117; mir-139


Sequence

ucagguguauucuacagugcacgugucuccaguguggcucggaggcUGGAGACGCGGCCCUGUUGGAGUaacaacugaa
((((.((((((((((((.((.((((((((((((.(.......).)))))))))))))).))).)))))).))).)))).

Structure
-    g   -      -   u  a            g gg 
 ucag ugu auucua cag gc cgugucuccagu u  c
 |||| ||| |||||| ||| || |||||||||||| |  u
 aguc aca UGAGGU GUC CG GCGCAGAGGUcg a  c
a    a   a      U   C  -            g gg 


Annotation confidence Not enough data
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Genome context
JH977667.1: 1134562-1134640 [-]

Database links

Mature efu-miR-139

Accession MIMAT0035163
Description Eptesicus fuscus efu-miR-139 mature miRNA
Sequence 47 - UGGAGACGCGGCCCUGUUGGAGU - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545