miRBase entry: efu-mir-9186o-1

Stem-loop efu-mir-9186o-1


Accession
MI0028871
Description
Eptesicus fuscus efu-mir-9186o-1 precursor miRNA
Gene family
MIPF0001868; mir-9186


Sequence

uagggggaggGAGGUGGCAUGGCUGGUAGUAUGguaauggcagcccauacugccagacaugccaguuuccucacccuaca
(((((.(((((((.(((((((.((((((((((((..........)))))))))))).))))))).))))))).)))))..

Structure
--     g       G       G            uaau 
  uaggg gaggGAG UGGCAUG CUGGUAGUAUGg    g
  ||||| ||||||| ||||||| ||||||||||||     
  auccc cuccuuu accguac gaccgucauacc    g
ac     a       g       a            cgac 


Annotation confidence Not enough data
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Genome context
JH977753.1: 34824-34903 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from efu-mir-9186o-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9186o

Accession MIMAT0035091
Description Eptesicus fuscus efu-miR-9186o mature miRNA
Sequence 11 - GAGGUGGCAUGGCUGGUAGUAUG - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545