miRBase entry: efu-mir-25

Stem-loop efu-mir-25


Accession
MI0028874
Description
Eptesicus fuscus efu-mir-25 precursor miRNA
Gene family
MIPF0000013; mir-25


Sequence

gccaguguugagaggcggagacuugggcaauugcuggacgcugcccugggCAUUGCACUUGUCUCGGUCUGACAgugccggccc
(((.((((((..((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..)))))).)))..

Structure
--   a      ag    g     uu g     ug    acg 
  gcc guguug  aggc gagac  g gcaau  cugg   c
  ||| ||||||  |||| |||||  | |||||  ||||    
  cgg cgugAC  UCUG CUCUG  C CGUUA  gguc   u
cc   c      AG    G     UU A     Cg    ccg 


Annotation confidence Not enough data
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Genome context
JH977625.1: 7044806-7044889 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from efu-mir-25
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-25

Accession MIMAT0035166
Description Eptesicus fuscus efu-miR-25 mature miRNA
Sequence 51 - CAUUGCACUUGUCUCGGUCUGACA - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545