miRBase entry: efu-mir-9365

Stem-loop efu-mir-9365


Accession
MI0028893
Description
Eptesicus fuscus efu-mir-9365 precursor miRNA


Sequence

ggcccaaaccCUUACUUGUUCUGGCCUGUCCCUuuggguuuugucuccgggggucucucagggcaagagaaagaaaagcgguucgucagg
(((...(((((((.(((.(((((.((((..((((((((.......)))))))).....)))).).)))).)))..))).)))).)))...

Structure
---   cca    -   -A   G    - G    ---UC        uu 
   ggc   aacc CUU  CUU UUCU G CCUG     CCUuuggg  u
   |||   |||| |||  ||| |||| | ||||     ||||||||  u
   cug   uugg gaa  gaa gaga c ggac     gggggccu  g
gga   --c    c   aa   a    a g    ucucu        cu 


Annotation confidence Not enough data
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Genome context
JH977771.1: 805583-805672 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-9365
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9365

Accession MIMAT0035182
Description Eptesicus fuscus efu-miR-9365 mature miRNA
Sequence 11 - CUUACUUGUUCUGGCCUGUCCCU - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545