miRBase entry: efu-mir-506

Stem-loop efu-mir-506

Accession

MI0028895

Description

Eptesicus fuscus efu-mir-506 precursor miRNA

Gene family

MIPF0000130; mir-506

Sequence

uucagugcccUACUCAGGAAGGCAUCAUUCACAuaaauugauacaugaauggcaccuucugaguagcgcaaugugca
..((.(((.((((((((.((((..(((((((..((......))..)))))))..)))))))))))).))).))....

Structure

--uu  g   c        G    CA       CA  aa 
    ca ugc cUACUCAG AAGG  UCAUUCA  ua  u
    || ||| |||||||| ||||  |||||||  ||   
    gu acg gaugaguc uucc  gguaagu  au  u
acgu  a   c        -    ac       ac  ag

Annotation confidence Not enough data

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Genome context

JH977855.1: 594657-594733 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-506

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-506

Accession	MIMAT0035183
Description	Eptesicus fuscus efu-miR-506 mature miRNA
Sequence	11 - UACUCAGGAAGGCAUCAUUCACA - 33
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545