miRBase entry: efu-mir-320

Stem-loop efu-mir-320


Accession
MI0028904
Description
Eptesicus fuscus efu-mir-320 precursor miRNA
Gene family
MIPF0000163; mir-320


Sequence

cccgcucgccuccgccuucucuucccgguucuucccggagucgggAAAAGCUGGGUUGAGAGGGCGAAAAaggaagaggg
.((.(((.(((.(((((((((..(((((((.((((((....)))))).)))))))..)))))))))....)))..)))))

Structure
c  g   -g   ---c         uu       c      g 
 cc cuc  ccu    cgccuucuc  cccgguu uucccg a
 || |||  |||    |||||||||  ||||||| ||||||  
 gg gag  gga    GCGGGAGAG  GGGUCGA AAgggc g
-  -   aa   AAAA         UU       A      u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH977678.1: 7461979-7462058 [+]

Database links

Mature efu-miR-320

Accession MIMAT0035190
Description Eptesicus fuscus efu-miR-320 mature miRNA
Sequence 46 - AAAAGCUGGGUUGAGAGGGCGAAAA - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545