miRBase entry: efu-mir-9186h-2

Stem-loop efu-mir-9186h-2


Accession
MI0028913
Description
Eptesicus fuscus efu-mir-9186h-2 precursor miRNA
Gene family
MIPF0001868; mir-9186


Sequence

uagggggaggUUGGCUGCAUCACUGGUACUGAGGUaauggcuguccccaguaccagacaugccgcccaccugcccauaca
...(((.((((.(((.((((..(((((((((.((..........)).)))))))))..)))).))).)))).))).....

Structure
--uag   g    U   U    CA         A  Uaau 
     ggg aggU GGC GCAU  CUGGUACUG GG    g
     ||| |||| ||| ||||  ||||||||| ||     
     ccc ucca ccg cgua  gaccaugac cc    g
acaua   g    c   c    ca         c  uguc 


Annotation confidence Not enough data
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Genome context
JH977753.1: 174721-174800 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from efu-mir-9186h-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9186h

Accession MIMAT0034951
Description Eptesicus fuscus efu-miR-9186h mature miRNA
Sequence 11 - UUGGCUGCAUCACUGGUACUGAGGU - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545