miRBase entry: dme-mir-9380

Stem-loop dme-mir-9380


Accession
MI0028929
Description
Drosophila melanogaster dme-mir-9380 precursor miRNA


Sequence

7 reads, 4 reads per million, 6 experiments
GCUCCUGCUGCAUCUGUUGGCGauagcgcucgucacucuuggccguguacuccgCCUCCAACAGAUCCAGCAGCAGa
....((((((((((((((((((...((((..((((....)))).))))....))))...)))))))...))))))).

Structure
GCUC       ---       ---    -aua    uc    c 
    CUGCUGC   AUCUGUU   GGCG    gcgc  guca u
    |||||||   |||||||   ||||    ||||  ||||  
    GACGACG   UAGACAA   CCgc    ugug  cggu c
---a       ACC       CCU    cuca    -c    u 


Annotation confidence Not enough data
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Genome context
chr3R: 8348702-8348778 [-]

Database links

Mature dme-miR-9380-5p

Accession MIMAT0035223
Description Drosophila melanogaster dme-miR-9380-5p mature miRNA
Sequence 1 - GCUCCUGCUGCAUCUGUUGGCG - 22
Evidence experimental
Illumina [1]

Mature dme-miR-9380-3p

Accession MIMAT0035224
Description Drosophila melanogaster dme-miR-9380-3p mature miRNA
Sequence 55 - CCUCCAACAGAUCCAGCAGCAG - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23882112
    The impact of age, biogenesis, and genomic clustering on Drosophila microRNA evolution
    "Mohammed J, Flynt AS, Siepel A, Lai EC"
    "RNA (2013) 19:1295-1308