Stem-loop dme-mir-9388

Accession

MI0028938

Description

Drosophila melanogaster dme-mir-9388 precursor miRNA

Sequence

1611 reads, 201 reads per million, 17 experiments

caaguauuuugguacGUAUGUAUGUAUGUACAUACAUGuguauaugguacauucaUGUAGUACAUACAUACAUAUGUaugcaaguacguacg
...((((((..((((((((((((((((((((.(((((((((((...)))))..))))))))))))))))))))))))))..)))))).....

Structure

--caa      ug                    A      --     a 
     guauuu  guacGUAUGUAUGUAUGUAC UACAUG  uguau  
     ||||||  |||||||||||||||||||| ||||||  ||||| u
     caugaa  uaUGUAUACAUACAUACAUG AUGUac  acaug  
gcaug      cg                    -      uu     g 

Annotation confidence High

Genome context

chr3L: 22945116-22945207 [+]

Mature dme-miR-9388-5p

• Accession: MIMAT0035238
• Description: Drosophila melanogaster dme-miR-9388-5p mature miRNA
• Sequence: 16 - GUAUGUAUGUAUGUACAUACAUG - 38
• Evidence: experimental ; Illumina [1]

Mature dme-miR-9388-3p

• Accession: MIMAT0035239
• Description: Drosophila melanogaster dme-miR-9388-3p mature miRNA
• Sequence: 56 - UGUAGUACAUACAUACAUAUGU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23882112
   The impact of age, biogenesis, and genomic clustering on Drosophila microRNA evolution
   "Mohammed J, Flynt AS, Siepel A, Lai EC"
   "RNA (2013) 19:1295-1308