miRBase entry: gsa-mir-279

Stem-loop gsa-mir-279


Accession
MI0028941
Description
Gyrodactylus salaris gsa-mir-279 precursor miRNA


Sequence

AGUGAGUGAUAUUCUAUUCCAUGaucuagauucaUGACUAGAAUGAGCACUCACGCC
.(((((((.(((((((.((.((((.......)))))).)))))))..)))))))...

Structure
--A       -A       U  C    uc 
   GUGAGUG  UAUUCUA UC AUGa  u
   |||||||  ||||||| || ||||  a
   CACUCAC  GUAAGAU AG Uacu  g
CCG       GA       C  -    ua 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature gsa-miR-279-5p

Accession MIMAT0035244
Description Gyrodactylus salaris gsa-miR-279-5p mature miRNA
Sequence 1 - AGUGAGUGAUAUUCUAUUCCAUG - 23
Evidence experimental
Illumina [1]

Mature gsa-miR-279-3p

Accession MIMAT0035245
Description Gyrodactylus salaris gsa-miR-279-3p mature miRNA
Sequence 35 - UGACUAGAAUGAGCACUCACGCC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24025793
    Substantial loss of conserved and gain of novel MicroRNA families in flatworms
    "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
    "Mol Biol Evol (2013) 30:2619-2628