miRBase entry: gsa-mir-71a

Stem-loop gsa-mir-71a


Accession
MI0028942
Description
Gyrodactylus salaris gsa-mir-71a precursor miRNA


Sequence

UGAAAGACAUGGGUAAUGAGUaucaucuaaguuCUCAUUAUUCCUGUCCUUCAUA
((((.((((.((((((((((.............)))))))))).)))).))))..

Structure
--    A    U          Uauca 
  UGAA GACA GGGUAAUGAG     u
  |||| |||| ||||||||||     c
  ACUU CUGU CUUAUUACUC     u
AU    C    C          uugaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature gsa-miR-71a-5p

Accession MIMAT0035246
Description Gyrodactylus salaris gsa-miR-71a-5p mature miRNA
Sequence 1 - UGAAAGACAUGGGUAAUGAGU - 21
Evidence experimental
Illumina [1]

Mature gsa-miR-71a-3p

Accession MIMAT0035247
Description Gyrodactylus salaris gsa-miR-71a-3p mature miRNA
Sequence 34 - CUCAUUAUUCCUGUCCUUCAUA - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24025793
    Substantial loss of conserved and gain of novel MicroRNA families in flatworms
    "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
    "Mol Biol Evol (2013) 30:2619-2628