miRBase entry: gsa-mir-2a

Stem-loop gsa-mir-2a


Accession
MI0028952
Description
Gyrodactylus salaris gsa-mir-2a precursor miRNA


Sequence

GUCCGAGUGCGACUGUGAUGUUaugucauguuugcaaUAUCACAGUCCUGCUUUGGUGACGG
((((.((.(((((((((((((..((.((....)))))))))))))))..)).)).).)))..

Structure
--   - G  U  --           Ua  u  u 
  GUC C AG GC  GACUGUGAUGU  ug ca g
  ||| | || ||  |||||||||||  || ||  
  CAG G UU CG  CUGACACUAUa  ac gu u
GG   U G  U  UC           --  -  u 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature gsa-miR-2a-5p

Accession MIMAT0035266
Description Gyrodactylus salaris gsa-miR-2a-5p mature miRNA
Sequence 1 - GUCCGAGUGCGACUGUGAUGUU - 22
Evidence experimental
Illumina [1]

Mature gsa-miR-2a-3p

Accession MIMAT0035267
Description Gyrodactylus salaris gsa-miR-2a-3p mature miRNA
Sequence 38 - UAUCACAGUCCUGCUUUGGUGACGG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24025793
    Substantial loss of conserved and gain of novel MicroRNA families in flatworms
    "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
    "Mol Biol Evol (2013) 30:2619-2628