miRBase entry: gsa-mir-124a

Stem-loop gsa-mir-124a


Accession
MI0028956
Description
Gyrodactylus salaris gsa-mir-124a precursor miRNA


Sequence

GGUAUUUUCCACGAAGUCUUAGGaaguugaaaaauaaaauauuuaacuUAAGGCACGCGGUGAAUACC
(((((((.((.((..((((((...(((((((..........))))))))))))).)).)).)))))))

Structure
       U  A  AA      GGa       aaau 
GGUAUUU CC CG  GUCUUA   aguugaa    a
||||||| || ||  ||||||   |||||||     
CCAUAAG GG GC  CGGAAU   ucaauuu    a
       U  C  -A      ---       auaa 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature gsa-miR-124a-5p

Accession MIMAT0035274
Description Gyrodactylus salaris gsa-miR-124a-5p mature miRNA
Sequence 1 - GGUAUUUUCCACGAAGUCUUAGG - 23
Evidence experimental
Illumina [1]

Mature gsa-miR-124a-3p

Accession MIMAT0035275
Description Gyrodactylus salaris gsa-miR-124a-3p mature miRNA
Sequence 49 - UAAGGCACGCGGUGAAUACC - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24025793
    Substantial loss of conserved and gain of novel MicroRNA families in flatworms
    "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
    "Mol Biol Evol (2013) 30:2619-2628