miRBase entry: gsa-mir-7

Stem-loop gsa-mir-7


Accession
MI0028960
Description
Gyrodactylus salaris gsa-mir-7 precursor miRNA


Sequence

UGGAAGACUUGUGAUUGAGUUGUUucgaacuauauacucccuauacgagaguaugaaCAACCAUCCAAUUCUUCCGAA
(((((((.(((.(((.(.(((((((........((((((.(.....).)))))))))))))))))))).)))))))..

Structure
--       C   U   U A       cgaacuau      c u 
  UGGAAGA UUG GAU G GUUGUUu        auacuc c a
  ||||||| ||| ||| | |||||||        |||||| | u
  GCCUUCU AAC CUA C CAACaag        uaugag g a
AA       U   -   - -       --------      a c 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature gsa-miR-7-5p

Accession MIMAT0035282
Description Gyrodactylus salaris gsa-miR-7-5p mature miRNA
Sequence 1 - UGGAAGACUUGUGAUUGAGUUGUU - 24
Evidence experimental
Illumina [1]

Mature gsa-miR-7-3p

Accession MIMAT0035283
Description Gyrodactylus salaris gsa-miR-7-3p mature miRNA
Sequence 58 - CAACCAUCCAAUUCUUCCGAA - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24025793
    Substantial loss of conserved and gain of novel MicroRNA families in flatworms
    "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
    "Mol Biol Evol (2013) 30:2619-2628