miRBase entry: gsa-mir-278

Stem-loop gsa-mir-278


Accession
MI0028966
Description
Gyrodactylus salaris gsa-mir-278 precursor miRNA


Sequence

ACAAGGGUCCUUCAACCGCUAAGUAcccaacauuugguaCUCGGUGGGAGUAUUUUUGUAC
((((((((.((((.((((...((((((........)))))))))).)))).))))))))..

Structure
--        C    A    CUA      caa 
  ACAAGGGU CUUC ACCG   AGUAcc   c
  |||||||| |||| ||||   ||||||    
  UGUUUUUA GAGG UGGC   UCaugg   a
CA        U    G    ---      uuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature gsa-miR-278-5p

Accession MIMAT0035294
Description Gyrodactylus salaris gsa-miR-278-5p mature miRNA
Sequence 1 - ACAAGGGUCCUUCAACCGCUAAGUA - 25
Evidence experimental
Illumina [1]

Mature gsa-miR-278-3p

Accession MIMAT0035295
Description Gyrodactylus salaris gsa-miR-278-3p mature miRNA
Sequence 40 - CUCGGUGGGAGUAUUUUUGUAC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24025793
    Substantial loss of conserved and gain of novel MicroRNA families in flatworms
    "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
    "Mol Biol Evol (2013) 30:2619-2628