miRBase entry: gsa-mir-9389

Stem-loop gsa-mir-9389


Accession
MI0028978
Description
Gyrodactylus salaris gsa-mir-9389 precursor miRNA


Sequence

CGGCGCUUUGAUUGUCCACACUGAaucaucucugcacauguuugcaacguucAGUGUGCACACAAGGUUCCAUA
.((.((((((..(((.((((((((((......((((......))))..)))))))))).))))))))).))...

Structure
--C  C      AU   C          caucuc    ca 
   GG GCUUUG  UGU CACACUGAau      ugca  u
   || ||||||  ||| ||||||||||      ||||   
   CC UGGAAC  ACA GUGUGAcuug      acgu  g
AUA  U      --   C          ----ca    uu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature gsa-miR-9389-5p

Accession MIMAT0035318
Description Gyrodactylus salaris gsa-miR-9389-5p mature miRNA
Sequence 1 - CGGCGCUUUGAUUGUCCACACUGA - 24
Evidence experimental
Illumina [1]

Mature gsa-miR-9389-3p

Accession MIMAT0035319
Description Gyrodactylus salaris gsa-miR-9389-3p mature miRNA
Sequence 53 - AGUGUGCACACAAGGUUCCAUA - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24025793
    Substantial loss of conserved and gain of novel MicroRNA families in flatworms
    "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
    "Mol Biol Evol (2013) 30:2619-2628