miRBase entry: gsa-mir-9394b

Stem-loop gsa-mir-9394b


Accession
MI0028993
Description
Gyrodactylus salaris gsa-mir-9394b precursor miRNA


Sequence

AGAGGAAUCUGGAUCAGUGGCauuggcuugccaauauucuugUCGCGAGUUCGAUUCCUCCCUA
.((((((((.((((..((((((((((....))))......))))))..))))))))))))....

Structure
---A        U    CA      ------    c 
    GAGGAAUC GGAU  GUGGCa      uugg u
    |||||||| ||||  ||||||      ||||  
    CUCCUUAG CUUG  CGCUgu      aacc u
AUCC        -    AG      ucuuau    g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature gsa-miR-9394b-5p

Accession MIMAT0035348
Description Gyrodactylus salaris gsa-miR-9394b-5p mature miRNA
Sequence 1 - AGAGGAAUCUGGAUCAGUGGC - 21
Evidence experimental
Illumina [1]

Mature gsa-miR-9394b-3p

Accession MIMAT0035349
Description Gyrodactylus salaris gsa-miR-9394b-3p mature miRNA
Sequence 43 - UCGCGAGUUCGAUUCCUCCCUA - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24025793
    Substantial loss of conserved and gain of novel MicroRNA families in flatworms
    "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
    "Mol Biol Evol (2013) 30:2619-2628