Stem-loop gsa-mir-9401

Accession

MI0028994

Description

Gyrodactylus salaris gsa-mir-9401 precursor miRNA

Sequence

UGUACUGGCUGUUCCAUCAAUUaggcagguuauuaguCAUGGUGGCACAUCCAGAUACAUA
((((((((.(((.(((((((((((........)))))..)))))).))).)))).))))..

Structure

--    -    C   U      --     gca 
  UGUA CUGG UGU CCAUCA  AUUag   g
  |||| |||| ||| ||||||  |||||    
  ACAU GACC ACA GGUGGU  ugauu   g
AU    A    U   C      AC     auu 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-9401-5p

• Accession: MIMAT0035350
• Description: Gyrodactylus salaris gsa-miR-9401-5p mature miRNA
• Sequence: 1 - UGUACUGGCUGUUCCAUCAAUU - 22
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9401-3p

• Accession: MIMAT0035351
• Description: Gyrodactylus salaris gsa-miR-9401-3p mature miRNA
• Sequence: 38 - CAUGGUGGCACAUCCAGAUACAUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628