miRBase entry: gsa-mir-9402

Stem-loop gsa-mir-9402


Accession
MI0028995
Description
Gyrodactylus salaris gsa-mir-9402 precursor miRNA


Sequence

GUGAAAGAGGUUUGGAUUGAAAuaagggucuuuaugauucgauuacauuUCAUUUCUAACCUCUUUGCAAUU
((.(((((((((.(((.((((((..(((((.....)))))......)))))).))).)))))))))))....

Structure
----  G         U   U      ----aa     u 
    GU AAAGAGGUU GGA UGAAAu      ggguc u
    || ||||||||| ||| ||||||      ||||| u
    CG UUUCUCCAA CUU ACUuua      cuuag a
UUAA  -         U   U      cauuag     u 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature gsa-miR-9402-5p

Accession MIMAT0035352
Description Gyrodactylus salaris gsa-miR-9402-5p mature miRNA
Sequence 1 - GUGAAAGAGGUUUGGAUUGAAA - 22
Evidence experimental
Illumina [1]

Mature gsa-miR-9402-3p

Accession MIMAT0035353
Description Gyrodactylus salaris gsa-miR-9402-3p mature miRNA
Sequence 50 - UCAUUUCUAACCUCUUUGCAAUU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24025793
    Substantial loss of conserved and gain of novel MicroRNA families in flatworms
    "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
    "Mol Biol Evol (2013) 30:2619-2628