Stem-loop gsa-mir-9405

Accession

MI0028998

Description

Gyrodactylus salaris gsa-mir-9405 precursor miRNA

Sequence

UCGCGUAUUUAAGGUUUCAAUCgagaauguccuuucauuauucagAAUGAAAUUUGACUUACGCAUC
..(((((....((((((((.(((((((((......)))).))).)).))))))))....)))))...

Structure

-UC     UUUA        A  -   -    uc 
   GCGUA    AGGUUUCA UC gag aaug  c
   |||||    |||||||| || ||| ||||   
   CGCAU    UUUAAAGU Ag cuu uuac  u
CUA     UCAG        A  a   a    uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-9405-5p

• Accession: MIMAT0035358
• Description: Gyrodactylus salaris gsa-miR-9405-5p mature miRNA
• Sequence: 1 - UCGCGUAUUUAAGGUUUCAAUC - 22
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9405-3p

• Accession: MIMAT0035359
• Description: Gyrodactylus salaris gsa-miR-9405-3p mature miRNA
• Sequence: 46 - AAUGAAAUUUGACUUACGCAUC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628