Stem-loop xtr-mir-9407

Accession

MI0029000

Description

Xenopus tropicalis xtr-mir-9407 precursor miRNA

Sequence

gggcguggccUGCGCUCGGUGGAUAGAAGACGUGAucuaaggcuuagaacacgacuucuaucugccgagcguaggccacaccccccauuauuuuu
(((.(((((((((((((((((((((((((.((((.(((((...))))).)))).))))))))))))))))))))))))).)))............

Structure

------------   c                         A    A     g 
            ggg guggccUGCGCUCGGUGGAUAGAAG CGUG ucuaa  
            ||| ||||||||||||||||||||||||| |||| ||||| g
            ccc caccggaugcgagccgucuaucuuc gcac agauu  
uuuuuauuaccc   a                         a    a     c 

Annotation confidence Not enough data

Genome context

chr7: 25022371-25022465 [-]

Mature xtr-miR-9407

• Accession: MIMAT0035361
• Description: Xenopus tropicalis xtr-miR-9407 mature miRNA
• Sequence: 11 - UGCGCUCGGUGGAUAGAAGACGUGA - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24065776
   Small RNA profiling of Xenopus embryos reveals novel miRNAs and a new class of small RNAs derived from intronic transposable elements
   "Harding JL, Horswell S, Heliot C, Armisen J, Zimmerman LB, Luscombe NM, Miska EA, Hill CS"
   "Genome Res (2014) 24:96-106