Stem-loop sequence xtr-mir-9407

AccessionMI0029000
DescriptionXenopus tropicalis miR-9407 stem-loop
Stem-loop
   ------------   c               ug        a    a    a 
5'             ggg guggccugcgcucgg  gauagaag cgug ucua g
               ||| |||||||||||||||  |||||||| |||| |||| g
3'             ccc caccggaugcgagcc  cuaucuuc gcac agau c
   uuuuuauuaccc   a               gu        a    a    u 
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Confidence
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Genome context
Coordinates (JGI4.2) Overlapping transcripts
GL172848.1: 193070-193164 [-]
intergenic

Mature sequence xtr-miR-9407

Accession MIMAT0035361
Sequence

11 - 

ugcgcucgguggauagaagacguga

 - 35

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Evidence experimental; Illumina [1]

References

1
PMID:24065776 "Small RNA profiling of Xenopus embryos reveals novel miRNAs and a new class of small RNAs derived from intronic transposable elements" Harding JL, Horswell S, Heliot C, Armisen J, Zimmerman LB, Luscombe NM, Miska EA, Hill CS Genome Res. 24:96-106(2014).