Stem-loop bol-MIR9408

Accession

MI0029002

Description

Brassica oleracea bol-MIR9408 precursor miRNA

Gene family

MIPF0002027; MIR9408

Literature search

1 open access papers mention bol-MIR9408
(2 sentences)

Sequence

aacgaguuuugcucaggacaacauuuucaagauggaaaauguuuuugacuuauguagcugugaucaaauuuucgcagccacgguuaagucaaaaguauGUUUCAUCUUAGAGAAUGUUGUCcagaaccaau
...((((...)))).((((((((((((((((((((((.(((((((((((((((((.(((((((........))))))).)))..)))))))))))))).))))))))).))))))))))))).........

Structure

aacgaguuuugcuca             -         a              --   a       uca 
               ggacaacauuuuc aagauggaa auguuuuugacuua  ugu gcuguga   a
               ||||||||||||| ||||||||| ||||||||||||||  ||| |||||||    
               cCUGUUGUAAGAG UUCUACUUU uaugaaaacugaau  gca cgacgcu   a
------uaaccaaga             A         G              ug   c       uuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature bol-miR9408

• Accession: MIMAT0035363
• Description: Brassica oleracea bol-miR9408 mature miRNA
• Sequence: 99 - GUUUCAUCUUAGAGAAUGUUGUC - 121
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24245539
   High-throughput sequencing identification of novel and conserved miRNAs in the Brassica oleracea leaves
   Lukasik A, Pietrykowska H, Paczek L, Szweykowska-Kulinska Z, Zielenkiewicz P
   BMC Genomics (2013) 14:801