miRBase entry: bol-MIR9411

Stem-loop bol-MIR9411


Accession
MI0029005
Description
Brassica oleracea bol-MIR9411 precursor miRNA

Literature search
2 open access papers mention bol-MIR9411
(3 sentences)

Sequence

accugagacgacuuccauguaagucgucuagguauaacaaaauauugauuuuuuuaauuuuaUACUGGACGACUUACACGGAAGucguccagga
.((((.((((((((((.((((((((((((((.(((((......(((((.....))))).))))))))))))))))))).)))))))))))))).

Structure
a    a          a              g     caaaau     u 
 ccug gacgacuucc uguaagucgucuag uauaa      auuga u
 |||| |||||||||| |||||||||||||| |||||      ||||| u
 ggac cugcuGAAGG ACAUUCAGCAGGUC AUauu      uaauu u
a    -          C              -     -----u     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bol-miR9411

Accession MIMAT0035366
Description Brassica oleracea bol-miR9411 mature miRNA
Sequence 63 - UACUGGACGACUUACACGGAAG - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24245539
    High-throughput sequencing identification of novel and conserved miRNAs in the Brassica oleracea leaves
    Lukasik A, Pietrykowska H, Paczek L, Szweykowska-Kulinska Z, Zielenkiewicz P
    BMC Genomics (2013) 14:801