miRBase entry: nve-mir-9413-2

Stem-loop nve-mir-9413-2


Accession
MI0029014
Description
Nematostella vectensis nve-mir-9413-2 precursor miRNA
Gene family
MIPF0002079; mir-9413


Sequence

856 reads, 1680 reads per million, 9 experiments
cugcugaaaccauaucacuuaucacuuaauggguuauccUAAAAGUGAUCAGUGGUAAGGUuucagua
.((((((((((.(((((((.(((((((..((((....)))).))))))).))))))).))))))))))

Structure
c          a       u       aa    u 
 ugcugaaacc uaucacu aucacuu  uggg u
 |||||||||| ||||||| |||||||  ||||  
 augacuuUGG AUGGUGA UAGUGAA  AUcc a
-          A       C       -A    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_230: 176340-176407 [-]

Database links

Mature nve-miR-9413

Accession MIMAT0035368
Description Nematostella vectensis nve-miR-9413 mature miRNA
Sequence 40 - UAAAAGUGAUCAGUGGUAAGGU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663